STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pitx2Paired like homeodomain 2. (313 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 
 0.531
pou1f1
POU class 1 homeobox 1.
   
 
 0.498
lef1
Lymphoid enhancer binding factor 1.
    
 
 0.473
LOC114867280
T-box transcription factor TBX5-A-like.
   
 
 0.426
LOC114850192
Left-right determination factor 2-like.
   
  
 0.425
LOC114843297
DAN domain family member 5-like.
      
 0.424
lrtm2
Leucine rich repeats and transmembrane domains 2.
    
 
 0.408
LOC114862205
Deoxycytidine kinase-like.
      
 0.403
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.