STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ica1Islet cell autoantigen 1. (474 aa)    
Predicted Functional Partners:
rab2a
RAB2A, member RAS oncogene family.
    
 
 0.631
LOC114860243
PRKCA-binding protein-like.
    
 
 0.587
ENSBSLP00000035018
annotation not available
    
 
 0.587
dnajc27
DnaJ heat shock protein family (Hsp40) member C27.
    
 
 0.527
rundc1
RUN domain containing 1.
    
 
 0.445
ccdc186
Coiled-coil domain containing 186.
      
 0.402
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.