STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000038961annotation not available (234 aa)    
Predicted Functional Partners:
LOC114851850
Cadherin-related family member 5-like.
   
 0.693
LOC114846475
Protocadherin-15-like.
   
 0.693
pcdh15
Protocadherin related 15.
   
 0.693
LOC114857027
Cadherin-related family member 5-like.
   
 0.693
CDH8
Cadherin 8.
   
 0.535
tmc3
Transmembrane channel like 3.
   
 
 0.528
TMC1
Transmembrane channel-like protein 1.
   
 
 0.528
CIB2
Calcium and integrin-binding family member 2-like.
   
 
 0.490
LOC114856962
Calcium and integrin-binding family member 2-like.
   
 
 0.490
LOC114844009
Calcium and integrin-binding family member 3-like.
   
 
 0.490
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.