STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pitpnc1Phosphatidylinositol transfer protein cytoplasmic 1. (336 aa)    
Predicted Functional Partners:
dolk
Dolichol kinase.
    
 0.688
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
    
 0.593
LOC114856852
Group XV phospholipase A2-like.
    
 0.593
CTDSP1
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like.
    
 0.512
ENSBSLP00000004311
annotation not available
    
 0.512
ctdspl
CTD small phosphatase like.
    
 0.512
ctdp1
CTD phosphatase subunit 1.
    
 0.512
ublcp1
Ubiquitin like domain containing CTD phosphatase 1.
    
 0.512
LOC114859492
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like.
    
 0.512
LOC114853578
CTD small phosphatase-like protein 3.
    
 0.512
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.