STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb5Ankyrin repeat and SOCS box containing 5. (332 aa)    
Predicted Functional Partners:
ENSBSLP00000034375
Elongin C paralog a.
    
 0.852
LOC114859989
elongin-B-like.
    
 0.754
ELOB
elongin-B.
    
 0.754
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.742
CUL5
Cullin-5-like.
    
 0.706
LOC114867766
Cullin-5.
    
 0.706
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.706
commd8
COMM domain containing 8.
   
  0.700
commd1
Copper metabolism domain containing 1.
    
  0.697
commd2
COMM domain containing 2.
    
 0.656
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.