STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114848272Complement component C1q receptor-like. (376 aa)    
Predicted Functional Partners:
f2
Coagulation factor II, thrombin.
    
 0.980
LOC114844190
Vitamin K-dependent protein C-like.
    
 0.897
LOC114844887
Tissue factor-like.
     
 0.805
plat
Plasminogen activator, tissue type.
   
 0.760
LOC114841773
Urokinase-type plasminogen activator-like.
   
 0.760
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.700
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.695
LOC114852358
Zinc finger protein 408-like.
    
  0.666
arid4b
AT-rich interaction domain 4B.
    
 0.647
arid4a
AT-rich interaction domain 4A.
    
 0.647
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.