nova1 protein (Betta splendens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

nova1

Uncharacterized LOC114869229. (524 aa)

Predicted Functional Partners:

LOC114844859

0.520

LOC114866707

0.498

hnrnpk

0.498

LOC114858646

0.463

LOC114864209

0.463

LOC114864211

0.463

hnrnpa3

0.463

sf1

0.424

LOC114855262

0.400

msi2

0.400

Your Current Organism:

Betta splendens

NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC114844859	nova1	ENSBSLP00000012409	ENSBSLP00000040353	bolA-like protein 2.	Uncharacterized LOC114869229.	0.520
LOC114855262	LOC114858646	ENSBSLP00000009357	ENSBSLP00000019345	RNA-binding protein Musashi homolog 1-like.	Heterogeneous nuclear ribonucleoprotein A1-like.	0.654
LOC114855262	LOC114864209	ENSBSLP00000009357	ENSBSLP00000036226	RNA-binding protein Musashi homolog 1-like.	Heterogeneous nuclear ribonucleoprotein A0-like.	0.653
LOC114855262	LOC114864211	ENSBSLP00000009357	ENSBSLP00000036285	RNA-binding protein Musashi homolog 1-like.	Heterogeneous nuclear ribonucleoprotein A0-like.	0.648
LOC114855262	LOC114866707	ENSBSLP00000009357	ENSBSLP00000004686	RNA-binding protein Musashi homolog 1-like.	Heterogeneous nuclear ribonucleoprotein K-like.	0.454
LOC114855262	hnrnpa3	ENSBSLP00000009357	ENSBSLP00000056358	RNA-binding protein Musashi homolog 1-like.	Heterogeneous nuclear ribonucleoprotein A3.	0.648
LOC114855262	hnrnpk	ENSBSLP00000009357	ENSBSLP00000007864	RNA-binding protein Musashi homolog 1-like.	Heterogeneous nuclear ribonucleoprotein K.	0.454
LOC114855262	msi2	ENSBSLP00000009357	ENSBSLP00000039409	RNA-binding protein Musashi homolog 1-like.	Musashi RNA binding protein 2.	0.812
LOC114855262	nova1	ENSBSLP00000009357	ENSBSLP00000040353	RNA-binding protein Musashi homolog 1-like.	Uncharacterized LOC114869229.	0.400
LOC114858646	LOC114855262	ENSBSLP00000019345	ENSBSLP00000009357	Heterogeneous nuclear ribonucleoprotein A1-like.	RNA-binding protein Musashi homolog 1-like.	0.654
LOC114858646	LOC114866707	ENSBSLP00000019345	ENSBSLP00000004686	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein K-like.	0.956
LOC114858646	hnrnpa3	ENSBSLP00000019345	ENSBSLP00000056358	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein A3.	0.852
LOC114858646	hnrnpk	ENSBSLP00000019345	ENSBSLP00000007864	Heterogeneous nuclear ribonucleoprotein A1-like.	Heterogeneous nuclear ribonucleoprotein K.	0.956
LOC114858646	msi2	ENSBSLP00000019345	ENSBSLP00000039409	Heterogeneous nuclear ribonucleoprotein A1-like.	Musashi RNA binding protein 2.	0.650
LOC114858646	nova1	ENSBSLP00000019345	ENSBSLP00000040353	Heterogeneous nuclear ribonucleoprotein A1-like.	Uncharacterized LOC114869229.	0.463
LOC114858646	sf1	ENSBSLP00000019345	ENSBSLP00000011460	Heterogeneous nuclear ribonucleoprotein A1-like.	Splicing factor 1.	0.545
LOC114864209	LOC114855262	ENSBSLP00000036226	ENSBSLP00000009357	Heterogeneous nuclear ribonucleoprotein A0-like.	RNA-binding protein Musashi homolog 1-like.	0.653
LOC114864209	LOC114866707	ENSBSLP00000036226	ENSBSLP00000004686	Heterogeneous nuclear ribonucleoprotein A0-like.	Heterogeneous nuclear ribonucleoprotein K-like.	0.892
LOC114864209	hnrnpk	ENSBSLP00000036226	ENSBSLP00000007864	Heterogeneous nuclear ribonucleoprotein A0-like.	Heterogeneous nuclear ribonucleoprotein K.	0.892
LOC114864209	msi2	ENSBSLP00000036226	ENSBSLP00000039409	Heterogeneous nuclear ribonucleoprotein A0-like.	Musashi RNA binding protein 2.	0.646