STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000040355annotation not available (149 aa)    
Predicted Functional Partners:
LOC114859586
Leucine-rich repeat LGI family member 2-like.
    
 0.562
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
  0.460
LOC114842656
Neutrophil cytosol factor 4-like.
    
  0.403
LOC114870711
Neutrophil cytosol factor 4-like.
    
  0.403
LOC114854362
SH3 and PX domain-containing protein 2A-like.
    
  0.403
ncf1
Neutrophil cytosolic factor 1.
    
  0.403
noxo1
NADPH oxidase organizer 1.
    
  0.403
LOC114846474
NADPH oxidase organizer 1-like.
    
  0.403
sh3pxd2b
SH3 and PX domains 2B.
    
  0.403
SH3PXD2A
SH3 and PX domains 2A.
    
  0.403
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.