STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000040558annotation not available (76 aa)    
Predicted Functional Partners:
ENSBSLP00000038525
annotation not available
    
 
 0.593
nsa2
NSA2 ribosome biogenesis factor.
    
 
 0.541
rabep2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.535
sgf29
SAGA complex associated factor 29.
      
 0.528
tufm
Tu translation elongation factor, mitochondrial.
      
 0.518
sh3rf3
SH3 domain containing ring finger 3.
      
 0.453
chac1
ChaC glutathione specific gamma-glutamylcyclotransferase 1.
   
  
 0.418
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.