STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcl7bBAF chromatin remodeling complex subunit BCL7B. (203 aa)    
Predicted Functional Partners:
arid2
AT-rich interaction domain 2.
    
 0.974
brd9
Bromodomain containing 9.
   
 0.973
LOC114846071
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like.
   
 0.965
actl6a
Actin like 6A.
   
 0.964
LOC114848797
BRD4-interacting chromatin-remodeling complex-associated protein-like.
    
 0.951
ENSBSLP00000035210
annotation not available
    
 0.949
ss18
SS18 subunit of BAF chromatin remodeling complex.
    
 0.949
LOC114866972
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like.
   
 0.934
smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.934
LOC114867000
B-cell CLL/lymphoma 7 protein family member A-like.
     
0.926
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.