STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857845Wilms tumor protein homolog. (445 aa)    
Predicted Functional Partners:
wtap
WT1 associated protein.
    
 
 0.651
ENSBSLP00000023804
annotation not available
    
 0.596
nr5a1
Nuclear receptor subfamily 5 group A member 1.
    
 0.596
bard1
BRCA1 associated RING domain 1.
    
 0.594
ENSBSLP00000048337
annotation not available
    
  0.578
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.564
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
    
 0.530
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.505
gtf3c3
General transcription factor IIIC subunit 3.
    
 0.497
kdm6b
Lysine demethylase 6B.
   
 0.494
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.