STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000040576annotation not available (48 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
    
 0.964
pcgf6
Polycomb group ring finger 6.
    
 0.964
RING1
Ring finger protein 1.
    
 0.962
rnf2
Ring finger protein 2.
    
 0.962
CBX2
Chromobox protein homolog 2-like.
     
0.952
LOC114844629
Polyhomeotic-like protein 3.
    
 0.946
ENSBSLP00000015674
Bmi1 polycomb ring finger oncogene 1a.
    
 0.907
pcgf2
Polycomb group ring finger 2.
    
 0.907
PCGF3
Polycomb group ring finger 3.
    
 0.902
pcgf5
Polycomb group ring finger 5.
    
 0.902
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.