STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap298Cilia and flagella associated protein 298. (290 aa)    
Predicted Functional Partners:
cfap300
Cilia and flagella associated protein 300.
    
 
 0.568
wdr92
WD repeat domain 92.
  
   
 0.560
zmynd10
Zinc finger MYND-type containing 10.
    
 
 0.548
dnaaf1
Dynein axonemal assembly factor 1.
      
 0.540
DNAAF5
Dynein assembly factor 5, axonemal-like.
      
 0.539
cfap20
Cilia and flagella associated protein 20.
      
 0.536
lrrc6
Leucine rich repeat containing 6.
      
 0.529
dnaaf3
Dynein axonemal assembly factor 3.
      
 0.528
dnali1
Dynein axonemal light intermediate chain 1.
  
   
 0.465
dnai1
Dynein axonemal intermediate chain 1.
   
  
 0.441
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.