STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsj3FtsJ RNA 2'-O-methyltransferase 3. (846 aa)    
Predicted Functional Partners:
wdr12
WD repeat domain 12.
   
 0.999
rsl24d1
Ribosomal L24 domain containing 1.
   
 0.999
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.999
ebna1bp2
EBNA1 binding protein 2.
   
 0.999
LOC114867891
WD repeat-containing protein 74-like.
   
 0.999
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.999
bop1
BOP1 ribosomal biogenesis factor.
   
 0.999
ddx55
DEAD-box helicase 55.
  
 0.999
gtpbp4
GTP binding protein 4.
   
 0.999
nsa2
NSA2 ribosome biogenesis factor.
  
 0.999
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.