STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842781RNA-binding protein 24-like. (236 aa)    
Predicted Functional Partners:
LOC114842767
RNA binding protein fox-1 homolog 1-like.
  
 
0.726
LOC114858124
RNA binding protein fox-1 homolog 2-like.
  
 
0.694
LOC114860228
RNA binding protein fox-1 homolog 2-like.
  
 
0.691
LOC114848281
ELAV-like protein 1.
  
 
 
 0.564
LOC114853617
ELAV-like protein 1.
  
 
 
 0.563
sf3b5
Splicing factor 3b subunit 5.
     
 0.531
sf3b1
Splicing factor 3b subunit 1.
     
 0.528
sf3b3
Splicing factor 3b subunit 3.
     
 0.516
ddx42
DEAD-box helicase 42.
    
  0.512
sf3b4
Splicing factor 3b subunit 4.
     
 0.503
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.