STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malsu1Mitochondrial assembly of ribosomal large subunit 1. (234 aa)    
Predicted Functional Partners:
rpl23
Ribosomal protein L23.
    
 
 0.994
ENSBSLP00000005948
Mitochondrial ribosomal protein L21.
  
   0.991
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.989
mrpl17
Mitochondrial ribosomal protein L17.
  
   0.989
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.980
mtg1
Mitochondrial ribosome associated GTPase 1.
  
 
 0.979
mrpl20
Mitochondrial ribosomal protein L20.
   
 
 0.977
mrm3
Mitochondrial rRNA methyltransferase 3.
   
 
 0.973
mrpl24
Mitochondrial ribosomal protein L24.
   
 
 0.971
mrpl47
Mitochondrial ribosomal protein L47.
   
   0.970
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.