STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114844382Transcription termination factor 4, mitochondrial-like. (347 aa)    
Predicted Functional Partners:
nsun4
NOP2/Sun RNA methyltransferase 4.
    
 0.973
nsun3
NOP2/Sun RNA methyltransferase 3.
    
 0.968
mrpl58
Mitochondrial ribosomal protein L58.
    
 
 0.882
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.881
mrpl12
Mitochondrial ribosomal protein L12.
    
 
 0.874
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
    
   0.854
mrpl32
Mitochondrial ribosomal protein L32.
   
 
 0.837
mtg1
Mitochondrial ribosome associated GTPase 1.
   
 
 0.836
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
    
 
 0.833
mrm2
Mitochondrial rRNA methyltransferase 2.
    
 
 0.824
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.