STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp36Ubiquitin specific peptidase 36. (1150 aa)    
Predicted Functional Partners:
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.750
rce1
Ras converting CAAX endopeptidase 1.
     
 0.741
ENSBSLP00000000230
BRMS1 transcriptional repressor and anoikis regulator.
    
  0.686
LOC114847256
Breast cancer metastasis-suppressor 1 homolog.
    
  0.686
brms1l
BRMS1 like transcriptional repressor.
    
  0.686
LOC114849517
Breast cancer metastasis-suppressor 1-like protein-A.
    
  0.686
cdc25b
Cell division cycle 25B.
    
 0.686
usp10
Ubiquitin specific peptidase 10.
     
0.595
dhx58
DExH-box helicase 58.
     
 0.568
p2rx7
Purinergic receptor P2X 7.
   
  0.514
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.