STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000041418annotation not available (522 aa)    
Predicted Functional Partners:
actl6a
Actin like 6A.
    
 0.855
LOC114866972
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like.
    
 0.751
smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.751
sap30l
SAP30 like.
    
 0.747
LOC114855556
Protein polybromo-1-like.
   
 0.730
LOC114855931
Protein polybromo-1-like.
   
 0.730
med7
Mediator complex subunit 7.
    
  0.628
sap18
Sin3A associated protein 18.
     
 0.627
phf12
PHD finger protein 12.
    
 0.626
med17
Mediator complex subunit 17.
    
  0.616
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.