STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zmynd10Zinc finger MYND-type containing 10. (444 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.998
IFT122
Intraflagellar transport 122.
   
 0.811
wdr35
WD repeat domain 35.
    
 0.811
ift140
Intraflagellar transport 140.
    
 0.804
LOC114860516
Voltage-dependent calcium channel gamma-1 subunit-like.
    
 0.789
nprl2
NPR2 like, GATOR1 complex subunit.
 
    
 0.775
RSPH1
Radial spoke head component 1.
   
 
 0.719
lrrc6
Leucine rich repeat containing 6.
    
 0.695
IFT43
Intraflagellar transport 43.
    
 0.685
dnaaf1
Dynein axonemal assembly factor 1.
  
 
 0.676
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.