STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114845687Patatin-like phospholipase domain-containing protein 7. (1250 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.867
nudt12
Nudix hydrolase 12.
  
  0.859
LOC114865067
HRAS-like suppressor 3.
   
 0.853
LOC114856852
Group XV phospholipase A2-like.
     
 0.853
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
  
 
 0.851
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
     
 0.842
LOC114864912
Malate synthase-like.
  
 0.837
ENSBSLP00000025484
annotation not available
   
 
 0.830
LOC114849988
Membrane-bound O-acyltransferase domain-containing protein 2-like.
   
 
 0.823
LOC114848016
Lysophospholipid acyltransferase 2-like.
   
 
 0.823
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.