STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpgN-methylpurine DNA glycosylase. (274 aa)    
Predicted Functional Partners:
apex1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
    
 0.743
apex2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
    
 0.682
mgmt
O-6-methylguanine-DNA methyltransferase.
     
 0.637
xrcc1
X-ray repair cross complementing 1.
    
 
 0.614
nthl1
Nth like DNA glycosylase 1.
   
  
 0.593
ogg1
8-oxoguanine DNA glycosylase.
     
 0.580
ung
Uracil DNA glycosylase.
     
 0.556
elp2
Elongator acetyltransferase complex subunit 2.
    
   0.551
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.531
lig1
DNA ligase 1.
     
 0.522
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.