STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ska1Spindle and kinetochore associated complex subunit 1. (247 aa)    
Predicted Functional Partners:
ENSBSLP00000028611
annotation not available
   
 0.998
ska3
Spindle and kinetochore associated complex subunit 3.
   
 0.998
ndc80
NDC80 kinetochore complex component.
   
 0.994
bub1b
BUB1 mitotic checkpoint serine/threonine kinase B.
   
 
 0.971
ENSBSLP00000023484
annotation not available
   
 
 0.958
cenpf
Centromere protein F.
   
 
 0.956
spdl1
Spindle apparatus coiled-coil protein 1.
   
 
  0.935
nuf2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.896
plk4
Polo like kinase 4.
   
 
 0.886
primpol
Primase and DNA directed polymerase.
   
 0.864
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.