STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkbp8FKBP prolyl isomerase 8. (415 aa)    
Predicted Functional Partners:
LOC114853980
Apoptosis regulator Bcl-2-like.
    
 
 0.812
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
   
 0.778
LOC114849323
Heat shock protein HSP 90-alpha 1.
   
 0.778
RYR3
Ryanodine receptor 3-like.
    
 0.766
tsc1
TSC complex subunit 1.
   
 0.755
usp30
Ubiquitin specific peptidase 30.
    
 0.751
trap1
TNF receptor associated protein 1.
   
 0.748
ENSBSLP00000008247
annotation not available
   
 0.735
aarsd1-2
alanyl-tRNA synthetase domain containing 1.
   
 0.711
myo3a
Myosin IIIA.
    
  0.710
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.