STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857213P53-induced death domain-containing protein 1-like. (909 aa)    
Predicted Functional Partners:
casp2
Caspase 2.
    
 0.967
LOC114870611
Peripheral plasma membrane protein CASK-like.
    
  0.918
cask
Calcium/calmodulin dependent serine protein kinase.
    
  0.918
tep1
Telomerase associated protein 1.
   
 0.900
LOC114843883
netrin-G1-like.
    
 0.890
ntng1
Netrin G1.
    
 0.890
COL22A1
Collagen type XXII alpha 1 chain.
   
 0.886
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.880
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.864
tonsl
Tonsoku like, DNA repair protein.
   
 0.859
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.