STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858263Solute carrier family 12 member 5-like. (1069 aa)    
Predicted Functional Partners:
nudt12
Nudix hydrolase 12.
   
  0.645
LOC114865079
Uncharacterized LOC114865079.
   
 0.645
mst1r
Macrophage stimulating 1 receptor.
    
  0.534
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.534
LOC114856141
Macrophage-stimulating protein receptor-like.
    
  0.534
LOC114843284
4F2 cell-surface antigen heavy chain-like.
  
 0.522
LOC114843289
4F2 cell-surface antigen heavy chain-like.
  
 0.522
LOC114843272
4F2 cell-surface antigen heavy chain-like.
  
 0.522
ENSBSLP00000000299
annotation not available
  
 0.522
alkbh3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
  
 0.522
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.