STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mea1Male-enhanced antigen 1. (190 aa)    
Predicted Functional Partners:
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7.
   
    0.833
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
    0.695
ndufa2
NADH:ubiquinone oxidoreductase subunit A2.
   
    0.560
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
   0.540
klhdc3
Kelch domain containing 3.
      
 0.539
golga3
Golgin A3.
      
 0.502
atp6v1f
ATPase H+ transporting V1 subunit F.
   
    0.489
cope
Coatomer protein complex subunit epsilon.
   
    0.483
sfi1
SFI1 centrin binding protein.
      
 0.480
mrpl2
Mitochondrial ribosomal protein L2.
   
  
 0.463
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.