STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk39Serine/threonine kinase 39. (511 aa)    
Predicted Functional Partners:
sec62
SEC62 homolog, preprotein translocation factor.
    
 0.975
sec63
SEC63 homolog, protein translocation regulator.
    
 0.957
sec61g
SEC61 translocon gamma subunit.
   
 0.931
sec61b
SEC61 translocon beta subunit.
    
 0.902
LOC114855673
Protein transport protein Sec61 subunit alpha-like 1.
    
 0.811
LOC114856187
Protein transport protein Sec61 subunit alpha-like 1.
    
 0.811
LOC114866111
Calcium-binding protein 39-like.
   
 0.702
cab39
Calcium binding protein 39.
   
 0.702
LOC114864606
Calcium-binding protein 39-like.
   
 0.702
prkaa1
Protein kinase AMP-activated catalytic subunit alpha 1.
  
0.673
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.