STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem204Transmembrane protein 204. (213 aa)    
Predicted Functional Partners:
kbtbd12
Kelch repeat and BTB domain containing 12.
   
  
 0.444
ccdc36
Coiled-coil domain containing 36.
      
 0.438
fibin
Fin bud initiation factor homolog.
  
   
 0.435
LOC114870410
Kinesin light chain 1-like.
      
 0.433
ENSBSLP00000012981
annotation not available
   
  
 0.418
tmem178a
Transmembrane protein 178A.
   
  
 0.417
xpc
XPC complex subunit, DNA damage recognition and repair factor.
      
 0.414
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.