STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000043364annotation not available (80 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
   0.995
rps3
Ribosomal protein S3.
   
 
 0.968
ENSBSLP00000056556
Ribosomal protein S15.
   
   0.954
rpl15
Ribosomal protein L15.
   
   0.953
rps2
Ribosomal protein S2.
   
   0.953
rpl31
Ribosomal protein L31.
   
 
 0.949
rack1
Receptor for activated C kinase 1.
   
 
 0.949
rpl18a
Ribosomal protein L18a.
   
 
 0.948
RPS20
Ribosomal protein S20.
   
 
 0.945
rps7
Ribosomal protein S7.
   
 
 0.944
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.