STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
morn3MORN repeat containing 3. (240 aa)    
Predicted Functional Partners:
LOC114868516
Rab5 GDP/GTP exchange factor-like.
   
 0.711
LOC114862273
Rab5 GDP/GTP exchange factor-like.
   
 0.711
LOC114869334
Rab5 GDP/GTP exchange factor-like.
   
 0.711
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.670
morn5
MORN repeat containing 5.
  
  
 0.661
rsph3
Radial spoke head 3.
   
 
 0.605
RSPH1
Radial spoke head component 1.
  
 
  
0.532
rsph9
Radial spoke head component 9.
   
 
 0.507
ENSBSLP00000025535
TP53 regulated inhibitor of apoptosis 1.
      
 0.470
spag17
Sperm associated antigen 17.
    
 
 0.461
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.