STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd1bSET domain containing 1B, histone lysine methyltransferase. (1756 aa)    
Predicted Functional Partners:
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.984
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.984
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.984
cxxc1
CXXC finger protein 1.
   
 0.984
LOC114855832
WD repeat-containing protein 82-like.
   
 0.965
twf2
Twinfilin actin binding protein 2.
   
 0.965
setd2
SET domain containing 2, histone lysine methyltransferase.
   
0.950
dot1l
DOT1 like histone lysine methyltransferase.
   
 0.943
hcfc1
Host cell factor C1.
   
 0.908
hcfc2
Host cell factor C2.
   
 0.908
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.