STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858872poly(rC)-binding protein 2-like. (350 aa)    
Predicted Functional Partners:
LOC114845192
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.751
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.749
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.738
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.735
rbmx
RNA binding motif protein X-linked.
   
 0.710
polr2l
RNA polymerase II subunit L.
   
  0.660
LOC114845021
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.654
polr2k
RNA polymerase II subunit K.
   
  0.646
polr2i
RNA polymerase II subunit I.
    
  0.645
polr2a
RNA polymerase II subunit A.
    
  0.645
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.