STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114853228Lysine-specific demethylase 4B-like. (1270 aa)    
Predicted Functional Partners:
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.740
kdm1a
Lysine demethylase 1A.
   
 0.686
znf217
Zinc finger protein 217.
    
  0.624
esr1
Estrogen receptor 1.
    
 0.607
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.606
ENSBSLP00000005007
annotation not available
    
 0.600
tp53bp1
Tumor protein p53 binding protein 1.
     
 0.594
nsd2
Nuclear receptor binding SET domain protein 2.
     
 0.592
H2AZ1
Histone H2A.Z.
    
 0.591
LOC114862464
Histone H2A.V.
    
 0.591
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.