STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan7Tetraspanin 7. (244 aa)    
Predicted Functional Partners:
LOC114860243
PRKCA-binding protein-like.
     
 0.692
ENSBSLP00000035018
annotation not available
     
 0.692
mst1r
Macrophage stimulating 1 receptor.
    
  0.646
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.646
LOC114856141
Macrophage-stimulating protein receptor-like.
    
  0.646
grip1
Glutamate receptor interacting protein 1.
     
 0.581
igsf8
Immunoglobulin superfamily member 8.
    
 
 0.493
LOC114856204
Glutamate receptor-interacting protein 2-like.
    
  0.482
LOC114858398
Glutamate receptor-interacting protein 2-like.
    
  0.482
LOC114851284
Glutamate receptor 2-like.
   
 
  0.481
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.