STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114849049Pericentrin-like. (4160 aa)    
Predicted Functional Partners:
KCNQ1
Potassium voltage-gated channel subfamily Q member 1.
    
 0.805
LOC114857181
Potassium voltage-gated channel subfamily KQT member 1-like.
    
 0.805
ift88
Intraflagellar transport 88.
   
 0.790
LOC114864903
Caltractin.
    
 0.760
LOC114864706
Caltractin-like.
    
 0.760
PLK1
Polo like kinase 1.
   
 0.759
plk2
Polo like kinase 2.
   
 0.759
plk3
Polo like kinase 3.
   
 0.759
tubg1
Tubulin gamma 1.
    
 0.749
pcm1
Pericentriolar material 1.
   
 0.737
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.