STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad52RAD52 homolog, DNA repair protein. (309 aa)    
Predicted Functional Partners:
fancm
FA complementation group M.
   
 0.998
rad51
RAD51 recombinase.
    
 0.997
slf1
SMC5-SMC6 complex localization factor 1.
     
 0.989
rpa3
Replication protein A3.
    
 0.984
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
    
 0.979
rpa1
Serpin family F member 2.
    
 0.979
ENSBSLP00000029314
annotation not available
    
 0.975
rpa2
Replication protein A2.
    
 0.975
rad50
RAD50 double strand break repair protein.
    
 0.974
meiob
Meiosis specific with OB-fold.
    
 0.968
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.