STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114842932Lymphocyte activation gene 3 protein-like. (533 aa)    
Predicted Functional Partners:
LOC114848347
Galectin-9-like.
    
 0.515
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.504
LOC114859985
Uncharacterized LOC114859985.
  
 
  0.484
epo
Erythropoietin.
  
 
  0.461
HGFAC
HGF activator.
    
  0.459
habp2
Hyaluronan binding protein 2.
    
  0.459
mre11
MRE11 homolog, double strand break repair nuclease.
    
 0.452
LOC114863211
Interleukin-1 beta-like.
   
 0.446
ENSBSLP00000029314
annotation not available
    
 0.444
rpa2
Replication protein A2.
    
 0.444
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]