STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114857937RNA polymerase II elongation factor ELL-like. (584 aa)    
Predicted Functional Partners:
eaf1
ELL associated factor 1.
    
 0.954
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.931
eaf2
ELL associated factor 2.
    
 0.928
aff4
AF4/FMR2 family member 4.
   
 0.924
LOC114867429
AF4/FMR2 family member 1-like.
   
 0.907
cdk9
Cyclin dependent kinase 9.
    
 0.902
ice2
Interactor of little elongation complex ELL subunit 2.
    
 0.901
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.855
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.841
polr2c
RNA polymerase II subunit C.
    
 0.836
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.