STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pla2g7Phospholipase A2 group VII. (409 aa)    
Predicted Functional Partners:
LOC114849542
Apolipoprotein B-100-like.
     
 0.946
LOC114857615
Phosphatidylcholine-sterol acyltransferase-like.
     
 0.938
LOC114842471
Serum paraoxonase/arylesterase 2-like.
     
 0.935
cetp
Cholesteryl ester transfer protein.
     
 0.925
apom
Apolipoprotein M.
     
 0.924
selenos
Selenoprotein S.
   
 
  0.923
lpl
Lipoprotein lipase.
     
 0.919
ENSBSLP00000050969
annotation not available
   
 
 0.907
pla2g4a
Phospholipase A2 group IVA.
     
 0.902
lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.902
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.