STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
utp25UTP25 small subunit processor component. (755 aa)    
Predicted Functional Partners:
wdr36
WD repeat domain 36.
   
 0.999
nol6
Nucleolar protein 6.
   
 0.999
utp3
UTP3 small subunit processome component.
   
 0.999
ngdn
Neuroguidin.
   
  0.999
mphosph10
M-phase phosphoprotein 10.
   
 0.999
nop14
NOP14 nucleolar protein.
   
 0.998
rrp36
Ribosomal RNA processing 36.
   
 0.998
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
  0.998
pdcd11
Programmed cell death 11.
   
 
 0.997
wdr46
WD repeat domain 46.
   
 
  0.996
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.