STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtpbp10GTP binding protein 10. (386 aa)    
Predicted Functional Partners:
mrpl20
Mitochondrial ribosomal protein L20.
  
 
 0.956
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.954
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.947
ENSBSLP00000005948
Mitochondrial ribosomal protein L21.
  
 
 0.936
mrpl11
Mitochondrial ribosomal protein L11.
  
 
 0.935
mrpl17
Mitochondrial ribosomal protein L17.
  
 
 0.930
mrpl32
Mitochondrial ribosomal protein L32.
  
 
 0.930
mrpl58
Mitochondrial ribosomal protein L58.
  
 
 0.921
rpl12
Ribosomal protein L12.
  
 
 0.917
ENSBSLP00000013136
Mitochondrial ribosomal protein L36.
    
 
 0.908
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.