STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grik1Glutamate ionotropic receptor kainate type subunit 1. (900 aa)    
Predicted Functional Partners:
grik5
Glutamate ionotropic receptor kainate type subunit 5.
  
 
0.795
LOC114866081
Glutamate receptor ionotropic, kainate 5-like.
  
 
0.795
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
  
 
0.794
ENSBSLP00000007389
annotation not available
 
  
0.788
LOC114866502
Glutamate receptor ionotropic, NMDA 1.
   
0.737
GRIN3A
Glutamate receptor ionotropic, NMDA 3A-like.
   
0.730
LOC114848193
Glutamate receptor ionotropic, NMDA 3B-like.
    
0.714
scn4b
Sodium voltage-gated channel beta subunit 4.
     
 0.703
scn3b
Sodium voltage-gated channel beta subunit 3.
   
 
 0.695
LOC114857493
Neuropilin and tolloid-like protein 2.
   
 0.695
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.