STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polr3aRNA polymerase III subunit A. (1402 aa)    
Predicted Functional Partners:
polr3f
RNA polymerase III subunit F.
   
 0.999
polr3d
RNA polymerase III subunit D.
   
 0.999
POLR2E
RNA polymerase II subunit E.
  
 0.999
LOC114864500
DNA-directed RNA polymerases I and III subunit RPAC2-like.
  
 0.999
polr2f
RNA polymerase II subunit F.
  
 0.999
polr2h
RNA polymerase II subunit H.
   
 0.999
LOC114860302
DNA-directed RNA polymerase III subunit RPC8-like.
   
 0.999
polr2l
RNA polymerase II subunit L.
  
 0.999
polr3e
RNA polymerase III subunit E.
   
 0.999
polr2k
RNA polymerase II subunit K.
   
 0.999
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.