STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000045107Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (599 aa)    
Predicted Functional Partners:
CUL5
Cullin-5-like.
    
 0.801
LOC114867766
Cullin-5.
    
 0.801
ENSBSLP00000034375
Elongin C paralog a.
    
 0.773
rnf7
Ring finger protein 7.
    
 0.752
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.742
commd8
COMM domain containing 8.
   
  0.704
commd1
Copper metabolism domain containing 1.
    
  0.679
cand1
Cullin associated and neddylation dissociated 1.
    
 0.672
commd2
COMM domain containing 2.
    
  0.652
commd9
COMM domain containing 9.
    
  0.652
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.