STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcea3Transcription elongation factor A3. (635 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.987
gtf2b
General transcription factor IIB.
   
 0.975
POLR2E
RNA polymerase II subunit E.
   
 0.972
polr2c
RNA polymerase II subunit C.
   
 0.971
gtf2e1
General transcription factor IIE subunit 1.
    
 0.971
polr2d
RNA polymerase II subunit D.
   
 0.970
polr2j
RNA polymerase II subunit J.
   
 0.970
polr2f
RNA polymerase II subunit F.
   
 0.970
polr2i
RNA polymerase II subunit I.
   
 0.969
polr2k
RNA polymerase II subunit K.
  
 0.969
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.