STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acp7Acid phosphatase 7, tartrate resistant (putative). (452 aa)    
Predicted Functional Partners:
nudt12
Nudix hydrolase 12.
   
 0.906
acp1
Acid phosphatase 1.
    
 0.905
acp5
Acid phosphatase 5, tartrate resistant.
     
 0.885
rfk
Riboflavin kinase.
    
 0.880
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.871
NT5E
5'-nucleotidase-like.
  
 
 0.867
ephx2
Epoxide hydrolase 2.
    
 0.860
flad1
Flavin adenine dinucleotide synthetase 1.
    
  0.847
minpp1
Multiple inositol-polyphosphate phosphatase 1.
     
 0.842
LOC114870403
Multiple inositol polyphosphate phosphatase 1-like.
     
 0.842
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.