STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114866756Bromodomain-containing protein 3-like. (544 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
 
  
 0.834
ruvbl2
RuvB like AAA ATPase 2.
 
  
 0.817
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.801
cdk9
Cyclin dependent kinase 9.
    
 0.791
yeats4
YEATS domain containing 4.
    
 0.789
cfdp1
Craniofacial development protein 1.
    
 0.781
LOC114854449
DNA methyltransferase 1-associated protein 1-like.
    
 0.777
ENSBSLP00000033708
DNA methyltransferase 1 associated protein 1.
    
 0.777
taf7l
TATA-box binding protein associated factor 7 like.
    
 0.771
actl6a
Actin like 6A.
    
 0.768
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.