STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnsGlucosamine (N-acetyl)-6-sulfatase. (542 aa)    
Predicted Functional Partners:
gusb
Glucuronidase beta.
  
 0.920
LOC114856783
Beta-hexosaminidase subunit alpha-like.
  
 0.883
hexb
Hexosaminidase subunit beta.
  
 0.883
glb1
Galactosidase beta 1.
  
 0.869
LOC114847545
Beta-galactosidase-like.
  
 0.869
med14
Mediator complex subunit 14.
    
 0.813
med6
Mediator complex subunit 6.
    
 0.802
med17
Mediator complex subunit 17.
    
 0.800
med7
Mediator complex subunit 7.
    
 0.800
med21
Mediator complex subunit 21.
   
 0.798
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.