STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858706Tyrosine-protein kinase SRK2-like. (504 aa)    
Predicted Functional Partners:
LOC114864433
SH2 domain-containing protein 1A-like.
   
 0.896
LOC114848647
T-cell surface glycoprotein CD3 zeta chain-like.
   
 0.824
mst1r
Macrophage stimulating 1 receptor.
    
0.818
met
MET proto-oncogene, receptor tyrosine kinase.
    
0.818
LOC114856141
Macrophage-stimulating protein receptor-like.
    
0.818
ptprc
Protein tyrosine phosphatase receptor type C.
   
 0.811
LOC114856106
Caveolin-3-like.
 
  
 0.791
ENSBSLP00000047985
annotation not available
   
 0.784
ENSBSLP00000056054
annotation not available
   
 0.780
matk
Megakaryocyte-associated tyrosine kinase.
  
0.772
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.